CDS

Accession Number TCMCG077C06532
gbkey CDS
Protein Id KAF5731788.1
Location complement(join(4003404..4003448,4003531..4003704,4004813..4004953,4006308..4006415,4007674..4007809,4007965..4008036,4008127..4008235,4008838..4008966,4009060..4009378,4009474..4009542,4009742..4010088,4010186..4010262,4011480..4011667,4011766..4012043,4012655..4012817,4013955..4014523,4014677..4014869,4014980..4015162,4016980..4017100,4017843..4017940,4018047..4018151,4019161..4019246,4019917..4020074,4021035..4021095,4021204..4021483,4021603..4021950))
Organism Tripterygium wilfordii
locus_tag HS088_TW18G00473

Protein

Length 1518aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA542587, BioSample:SAMN11634134
db_source JAAARO010000018.1
Definition nuclear pore complex protein [Tripterygium wilfordii]
Locus_tag HS088_TW18G00473

EGGNOG-MAPPER Annotation

COG_category UY
Description Nuclear pore complex protein NUP160 homolog
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K14303        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016973        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031965        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGAATCAGCAGATGGAGAATGGCGGGGATAGAAGTCCCAATCAGCGGGAGTGACTCCCTCAAGTGGATAGAAGTGAGTGTTCCAATCCCATACTGTTCTGATGCTGATGGTGATACTGCCATGGAAGTGCCTCCTCTGGGTCTCCCTCAGCTTTCCGCCTCTTGTTTGTCTTCTTGTTCGGTCATTGGAGATTCTCCGCATACTAGCTGCCTCATCTCCAGAATTGACGACTCCCGTCCTCACGCTATCGAGTTACTCCAGCTCTCTGCTTCTCGCCAACAACAAGGACTTCGCATCTCCTTCCCGCACGTCCTCTCCCCTTTTGTGTTCATCTGCAACAATGAGATTGAATCGTCTTCGAGGACCCCCTACTTGCTTTATGCTGTGACTGTCTCTGGAATTGTGTTCCTTCTGAAACTCGCAGACCTTTCTTCCTATGTATCTCATTCTGTCCTTTCTAGAGATCATTTCGTAGAGTTTAACCTGCATACTCATTCACATTCACATAATATAAATAATGCAACAATTACAAGCATAGCCGCTGCCGCCGGATGTCTTGTTGTTGGCAGAGATGATGGTTCCATTACTTCTTTCCGACTTGGCTCACTCCACCAGAGTGCTCCTGGGTTTTCCCATGAGCTGAGGGATGAATCTGGGATCAATCGTTTGTGGGGCTTCATGTCAAGGGGTAAGATTGCAGGGGCTGTTCAGGATTTGGTAATATCGGATATGCAAGGCAAAAAATATTTGTTTGTGCTTCATTCTTGTGGGAACATACGAGTTTGGGATCTTTCTTCTTATAGCAAGATATTTAGTCATTCCACAAGCGCTCCAACATCAGAAGGAGCTACACCTGTAAGGTTCTGGATAGGTGAAACTAATCGTGATTCTGGCTTTATTCCCATGGCTGTCCTTTATAAAATGGCTTCGGACGTTAGCGTGGAGGTTATATATGTCTATAGCTTCTCTTGTGGTTCAGGGGACAGGATCATTATGTCACTTGAGTCATCCGTGCAAAATATCCCTCTTGAGGAGGGGAAATGCATTGATGTACAACTTACCTCAGACAAGATTTGGATATTGAAGGATAATGGATTAGTTTCACAGAACTTACATCATTCAAATAGTAATGTGGAAGAACAATGTTATTATGCTCTAGGAGAGGAATTTGTTGCGGAGCAGCTATTTCAGTGTTCTGAACATTCTCCAGATGATCTTCTTTGTATTGCCCATACAGCATTATCGTCTACTAAGGATGACATTATGCATTTCGTGTCATCAATTTTCTTACGTAGACTGCTTCATCCCGGGGTTCATCATAATAACGTCTTGCGTGCAGCTTTCCTGGATTTTAACAGGCATTGGACTGATATTGAGTTCCAGTCATTAACTCTTAATGGACTAAAAAAGGAAATCCTTTCACTAATGGAGCATGAGGGTGTCAATGACAGTCCAATTTCAATACTTTATCGCTTGAAAAACTTCTGTACCCGATATTTCCATCATTGGTGCAAGCACAATGCAGCATCTGGTTTGCTTGTTCAATCCCCTGCAGGTGCTGTTTGTTTAGTCAGAAAGAATTCGGTGTCACTGTTTCGTGCCTTAGAAAATATTGAGTTGCTCATTGATGGTTCTTCTGATGAAGTTGGTGGTCTTGTTAGCTTTGAACACAATTTATCTCACAATGACTCAAAATGCGAGATTCTTTTTGAAGTTCTTAGATGTGTTATTAGTATCAGTCAACAATTGGGCAAAACAGCTTCTTCAATATATTATGAGTCACTAATTACACCAGATATTTCATCTGAAGAGATCATTGCTCGGCTAATTAAGATTCTTGAAATTGGATACAGTTCATCAGTGGCATCATCACTTTCATCAGGCCTGGGTGCTGATATTGTTTGGGATAAGGAGATGGCAGATCACAAAAACCTGAGGAAATTCTCCACCGACATGTTATTATCTCTTCAAGCTTTGTGCAAAAAAGCTACCTCATGGGGAAATGTTTTGAATGTTATTGAGAGCTATCTACAATTTCTTGTCCCTCAAAAGGTCTTTCAGAGCTATGATACAGTGACAGAATTTAACATCAAAGCTTCAATTCTGGTCCAGGCTACTTCTCAAATTGCAAAAGTTATGTTTGAGTCTACTTTTGACATTCTTCTGTTTGTAACCTATTTGGTGAACATCAGTGGCCGGATCAATATGTTGCGTGATGATATATCCAGAATACAACTTGAATTATTGCCGTTGATTGAAGAGACTGTGTCCCAGTGGCTTATCATTTATTTCTTTGCCACTACACCGTCCGAATCGCCTGCAATTGAAGATTTCAGTTCTCAACTTTCGTCGTTAAAAATTGATGGCAAGACTGATAAGAGATCATGGAGTGAAAATCTTGGCAAATGTGATTATACCTTGGGTTTAGTGCTTCTACTTACTGTTCAAAGTAGTTCTAGAGATCCAAGCCACCTTTCTTCAAGATGTCTCCCTTCTCCGCAAGACATTGTTTGTTCAGTGCGAGATTTTACAAGCTGGATTATTTGGGGCAAAACTGGCCAAGAATCTTGTAATTTCTTGAGGCGTGCGACTGAGCTTGCATTGATCCTGCTTAGGCATGGCCAATATAATGCTGTTGAGACAATTCTCAATATTGAGAAGGAAGATCTACGAAGGGAGAAGATATCTAGGAGTATTCAAGATCTTTCTGGCGATTGGTGCGTACTTCAACATCTTTTGGGATGTTGCTTTCTTATTCAGGCGCAATGTAAATTGCGTGGAATGCTGAAAGACAGGAAAGTTTGTGAAGCTATATGCTGTTTCTTCAGAGCTTCATCTGGACAAGGAGCATCCCAGGCTTTGCAGAGTTTGCCCCGGGAAGCTGGATTGCCGCATCTTGGTTTTGATGGTTGCGTGTCACCCGCTGCATGGAAGCTTCATTATTATCTTTGGGCAATGCAGATATTTGAGCAGTACAACATTAGCATAGGTGCTAGCCAATTCGCTCTTGCTGCACTTGAGCAAGTTGATGATGCTCTTAGCTTGAAAGATGAATCCTGTGATCAAGATCTAATCAATGAATCAGCAACTAGTATAAAAGGAAGACTCTGGGCAAATGTCTTCAAGTTTACTTTAGATCTTAATCTCCTGCATGATGCATATTGTGCCATAATTTCAAATCCAGATGAAGAGAATAAAGACATCTGCTTGAGGCGTTTTATAATAGTTCTTTGTGAGCATGGAGCAGCGAAGAGTCTTTGTGACGGTCAACTACCCTTCATTGGTTTAACAGAGAAGGTAGAGAGAGAGCTTGCCTGGAAGGCAGAGCGTTCTGATATCTTGGCCAAGCCAAACTCCTATAAATTACTTTATGCATTTGAAATGCACCGGCATAACTGGAGAAATGCAGCAAGTTACATATACAAATATTCAGCTCGTTTGAGGACTGAAGCAGTTCTGAAGGATTCCCAGGATATGTCACTAGTGCTACAAGAGAGGCTTAATGGCCTTTCTGCTACTATCAATGCTCTGCATCTTGTTAATCCTACATTTGCTTGGATCGATACTCCGCTTGAGGAAAGTCCTCATCACAACGAGCATTATTCAAGTAAAAAGGCTAAAAAGATAACAAACGAACAATTTTCTCGTGATGATGTTGAGCCTCAGAGGCTGCAATCGTACGTTGACATCAAGACACTTGAAAGTGAGTTTGTATTAACCTCGGCGCAGTATCTGCTCTCTTTGGCAAATTTAAAATGGAAATTTACCGGGATGCATAAAGCTCCATCAGATTTGGTTGAACTTTTGATCCAGGCAAATTTGTATGACATGGCATTTACAGTTCTTTTAAAATTTTGGAAGGGCTCAGCATTGAATAGGGAATTGGAAAGAGTTTTCTCTGCTATGTCACTGAAATGTTGTCCACATAAAGAAAGTTCCACATGGGCTGGGAATGATTCGGGAATGCATGGTCTTTTACTGACATCCTCAATGGATGAATTGATTCTCCATAGTGCCCCTGACTTGGGTCCTACAACTCAGCAACCTAAAGGGAAGACTCACTGGGAAATTCTTGAGCATTATCTGGAAAAATACAAAAATTTTCATGCTAGATTACCAGTGACAGTGGCTGAAACGCTTCTTCGTTCTGATCCTCATATTGAATTACCTTTGTGGCTGGTACATATCTTCAAGGGTGGTCGAAAAGAAAGGACTTGGGGTATGACGGGCCAAGAATCAAGTCCTGCATCTTTGCTTAAACTCTATGTTGATTATGGTCGGTATACTGAAGCTACAAATTTGTTGCTCGAGTACTTGGAAGCATTTGCATCAGTGAGACCAGCATACCTAATTAATCGGAAAAAGCCATTTTCAGTATGGTTTCCGTACACAATAATAGAGCGTCTATGGTGCCAACTGGAGGAAATGATCAGTTTGGGCCATATGGTTGATCAATATGCTAAGCTCAAAAACTTGTTACACGGAGCTTTGCTGAAACATCTCCAGCTGCTGAAGGTGGACTCCGACGATGCCATATCTGCTGCTCTCTGTTAA
Protein:  
MGISRWRMAGIEVPISGSDSLKWIEVSVPIPYCSDADGDTAMEVPPLGLPQLSASCLSSCSVIGDSPHTSCLISRIDDSRPHAIELLQLSASRQQQGLRISFPHVLSPFVFICNNEIESSSRTPYLLYAVTVSGIVFLLKLADLSSYVSHSVLSRDHFVEFNLHTHSHSHNINNATITSIAAAAGCLVVGRDDGSITSFRLGSLHQSAPGFSHELRDESGINRLWGFMSRGKIAGAVQDLVISDMQGKKYLFVLHSCGNIRVWDLSSYSKIFSHSTSAPTSEGATPVRFWIGETNRDSGFIPMAVLYKMASDVSVEVIYVYSFSCGSGDRIIMSLESSVQNIPLEEGKCIDVQLTSDKIWILKDNGLVSQNLHHSNSNVEEQCYYALGEEFVAEQLFQCSEHSPDDLLCIAHTALSSTKDDIMHFVSSIFLRRLLHPGVHHNNVLRAAFLDFNRHWTDIEFQSLTLNGLKKEILSLMEHEGVNDSPISILYRLKNFCTRYFHHWCKHNAASGLLVQSPAGAVCLVRKNSVSLFRALENIELLIDGSSDEVGGLVSFEHNLSHNDSKCEILFEVLRCVISISQQLGKTASSIYYESLITPDISSEEIIARLIKILEIGYSSSVASSLSSGLGADIVWDKEMADHKNLRKFSTDMLLSLQALCKKATSWGNVLNVIESYLQFLVPQKVFQSYDTVTEFNIKASILVQATSQIAKVMFESTFDILLFVTYLVNISGRINMLRDDISRIQLELLPLIEETVSQWLIIYFFATTPSESPAIEDFSSQLSSLKIDGKTDKRSWSENLGKCDYTLGLVLLLTVQSSSRDPSHLSSRCLPSPQDIVCSVRDFTSWIIWGKTGQESCNFLRRATELALILLRHGQYNAVETILNIEKEDLRREKISRSIQDLSGDWCVLQHLLGCCFLIQAQCKLRGMLKDRKVCEAICCFFRASSGQGASQALQSLPREAGLPHLGFDGCVSPAAWKLHYYLWAMQIFEQYNISIGASQFALAALEQVDDALSLKDESCDQDLINESATSIKGRLWANVFKFTLDLNLLHDAYCAIISNPDEENKDICLRRFIIVLCEHGAAKSLCDGQLPFIGLTEKVERELAWKAERSDILAKPNSYKLLYAFEMHRHNWRNAASYIYKYSARLRTEAVLKDSQDMSLVLQERLNGLSATINALHLVNPTFAWIDTPLEESPHHNEHYSSKKAKKITNEQFSRDDVEPQRLQSYVDIKTLESEFVLTSAQYLLSLANLKWKFTGMHKAPSDLVELLIQANLYDMAFTVLLKFWKGSALNRELERVFSAMSLKCCPHKESSTWAGNDSGMHGLLLTSSMDELILHSAPDLGPTTQQPKGKTHWEILEHYLEKYKNFHARLPVTVAETLLRSDPHIELPLWLVHIFKGGRKERTWGMTGQESSPASLLKLYVDYGRYTEATNLLLEYLEAFASVRPAYLINRKKPFSVWFPYTIIERLWCQLEEMISLGHMVDQYAKLKNLLHGALLKHLQLLKVDSDDAISAALC